Association Studies in Populus tomentosa Reveal the Genetic Interactions of Pto-MIR156c and Its Targets in Wood Formation.
Identifieur interne : 001998 ( Main/Exploration ); précédent : 001997; suivant : 001999Association Studies in Populus tomentosa Reveal the Genetic Interactions of Pto-MIR156c and Its Targets in Wood Formation.
Auteurs : Mingyang Quan [République populaire de Chine] ; Qingshi Wang [République populaire de Chine] ; Souksamone Phangthavong [République populaire de Chine] ; Xiaohui Yang [République populaire de Chine] ; Yuepeng Song [République populaire de Chine] ; Qingzhang Du [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine]Source :
- Frontiers in plant science [ 1664-462X ] ; 2016.
Abstract
MicroRNAs (miRNAs) regulate gene expression in many biological processes, but the significance of the interaction between a miRNA and its targets in perennial trees remains largely unknown. Here, we employed transcript profiling and association studies in Populus tomentosa (Pto) to decipher the effect of genetic variation and interactions between Pto-miR156c and its potential targets (Pto-SPL15, Pto-SPL20, and Pto-SPL25) in 435 unrelated individuals from a natural population of P. tomentosa. Single-SNP (single-nucleotide polymorphism) based association studies with analysis of the underlying additive and dominant effects identified 69 significant associations (P < 0.01), representing 51 common SNPs (minor allele frequency > 0.05) from Pto-MIR156c and its three potential targets, with six wood and growth traits, revealing their common roles in wood formation. Epistasis analysis uncovered 129 significant SNP-SNP associations with ten traits, indicating the potential genetic interactions of Pto-MIR156c and its three putative targets. Interestingly, expression analysis in stem (phloem, cambium, and xylem) revealed that Pto-miR156c expression showed strong negative correlations with Pto-SPL20 (r = -0.90, P < 0.01) and Pto-SPL25 (r = -0.65, P < 0.01), and a positive correlation with Pto-SPL15 (r = 0.40, P < 0.01), which also indicated the putative interactions of Pto-miR156c and its potential targets and their common roles in wood formation. Thus, our study provided an alternative approach to decipher the interaction between miRNAs and their targets and to dissect the genetic architecture of complex traits in trees.
DOI: 10.3389/fpls.2016.01159
PubMed: 27536313
PubMed Central: PMC4971429
Affiliations:
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Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2016">2016</date><idno type="RBID">pubmed:27536313</idno><idno type="pmid">27536313</idno><idno type="doi">10.3389/fpls.2016.01159</idno><idno type="pmc">PMC4971429</idno><idno type="wicri:Area/Main/Corpus">001662</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001662</idno><idno type="wicri:Area/Main/Curation">001662</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001662</idno><idno type="wicri:Area/Main/Exploration">001662</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Association Studies in Populus tomentosa Reveal the Genetic Interactions of Pto-MIR156c and Its Targets in Wood Formation.</title><author><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Qingshi" sort="Wang, Qingshi" uniqKey="Wang Q" first="Qingshi" last="Wang">Qingshi Wang</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Phangthavong, Souksamone" sort="Phangthavong, Souksamone" uniqKey="Phangthavong S" first="Souksamone" last="Phangthavong">Souksamone Phangthavong</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Yang, Xiaohui" sort="Yang, Xiaohui" uniqKey="Yang X" first="Xiaohui" last="Yang">Xiaohui Yang</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Song, Yuepeng" sort="Song, Yuepeng" uniqKey="Song Y" first="Yuepeng" last="Song">Yuepeng Song</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><idno type="ISSN">1664-462X</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">MicroRNAs (miRNAs) regulate gene expression in many biological processes, but the significance of the interaction between a miRNA and its targets in perennial trees remains largely unknown. Here, we employed transcript profiling and association studies in Populus tomentosa (Pto) to decipher the effect of genetic variation and interactions between Pto-miR156c and its potential targets (Pto-SPL15, Pto-SPL20, and Pto-SPL25) in 435 unrelated individuals from a natural population of P. tomentosa. Single-SNP (single-nucleotide polymorphism) based association studies with analysis of the underlying additive and dominant effects identified 69 significant associations (P < 0.01), representing 51 common SNPs (minor allele frequency > 0.05) from Pto-MIR156c and its three potential targets, with six wood and growth traits, revealing their common roles in wood formation. Epistasis analysis uncovered 129 significant SNP-SNP associations with ten traits, indicating the potential genetic interactions of Pto-MIR156c and its three putative targets. Interestingly, expression analysis in stem (phloem, cambium, and xylem) revealed that Pto-miR156c expression showed strong negative correlations with Pto-SPL20 (r = -0.90, P < 0.01) and Pto-SPL25 (r = -0.65, P < 0.01), and a positive correlation with Pto-SPL15 (r = 0.40, P < 0.01), which also indicated the putative interactions of Pto-miR156c and its potential targets and their common roles in wood formation. Thus, our study provided an alternative approach to decipher the interaction between miRNAs and their targets and to dissect the genetic architecture of complex traits in trees. </div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">27536313</PMID><DateCompleted><Year>2016</Year><Month>08</Month><Day>18</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-462X</ISSN><JournalIssue CitedMedium="Print"><Volume>7</Volume><PubDate><Year>2016</Year></PubDate></JournalIssue><Title>Frontiers in plant science</Title><ISOAbbreviation>Front Plant Sci</ISOAbbreviation></Journal><ArticleTitle>Association Studies in Populus tomentosa Reveal the Genetic Interactions of Pto-MIR156c and Its Targets in Wood Formation.</ArticleTitle><Pagination><MedlinePgn>1159</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fpls.2016.01159</ELocationID><Abstract><AbstractText>MicroRNAs (miRNAs) regulate gene expression in many biological processes, but the significance of the interaction between a miRNA and its targets in perennial trees remains largely unknown. Here, we employed transcript profiling and association studies in Populus tomentosa (Pto) to decipher the effect of genetic variation and interactions between Pto-miR156c and its potential targets (Pto-SPL15, Pto-SPL20, and Pto-SPL25) in 435 unrelated individuals from a natural population of P. tomentosa. Single-SNP (single-nucleotide polymorphism) based association studies with analysis of the underlying additive and dominant effects identified 69 significant associations (P < 0.01), representing 51 common SNPs (minor allele frequency > 0.05) from Pto-MIR156c and its three potential targets, with six wood and growth traits, revealing their common roles in wood formation. Epistasis analysis uncovered 129 significant SNP-SNP associations with ten traits, indicating the potential genetic interactions of Pto-MIR156c and its three putative targets. Interestingly, expression analysis in stem (phloem, cambium, and xylem) revealed that Pto-miR156c expression showed strong negative correlations with Pto-SPL20 (r = -0.90, P < 0.01) and Pto-SPL25 (r = -0.65, P < 0.01), and a positive correlation with Pto-SPL15 (r = 0.40, P < 0.01), which also indicated the putative interactions of Pto-miR156c and its potential targets and their common roles in wood formation. Thus, our study provided an alternative approach to decipher the interaction between miRNAs and their targets and to dissect the genetic architecture of complex traits in trees. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Quan</LastName><ForeName>Mingyang</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Qingshi</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Phangthavong</LastName><ForeName>Souksamone</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yang</LastName><ForeName>Xiaohui</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Song</LastName><ForeName>Yuepeng</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Du</LastName><ForeName>Qingzhang</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Deqiang</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>08</Month><Day>03</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Plant Sci</MedlineTA><NlmUniqueID>101568200</NlmUniqueID><ISSNLinking>1664-462X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Pto-miR156c</Keyword><Keyword MajorTopicYN="N">association genetics</Keyword><Keyword MajorTopicYN="N">epistasis</Keyword><Keyword MajorTopicYN="N">interaction</Keyword><Keyword MajorTopicYN="N">miRNA-mRNA</Keyword><Keyword MajorTopicYN="N">wood formation</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>04</Month><Day>22</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2016</Year><Month>07</Month><Day>19</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2016</Year><Month>8</Month><Day>19</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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2013 Sep;83(1-2):59-75</Citation><ArticleIdList><ArticleId IdType="pubmed">23771582</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2015 Feb;16(2):113-26</Citation><ArticleIdList><ArticleId IdType="pubmed">25488579</ArticleId></ArticleIdList></Reference><Reference><Citation>Development. 2006 Sep;133(18):3539-47</Citation><ArticleIdList><ArticleId IdType="pubmed">16914499</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11479-84</Citation><ArticleIdList><ArticleId IdType="pubmed">11562485</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Med Genomics. 2014 Aug 28;7:53</Citation><ArticleIdList><ArticleId IdType="pubmed">25169894</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2012 Jan;158(1):531-41</Citation><ArticleIdList><ArticleId IdType="pubmed">22052017</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2014 Sep;15(9):599-612</Citation><ArticleIdList><ArticleId IdType="pubmed">25022902</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2011 Feb;12(2):111-22</Citation><ArticleIdList><ArticleId IdType="pubmed">21245829</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2009 Feb 20;136(4):669-87</Citation><ArticleIdList><ArticleId IdType="pubmed">19239888</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2011 Oct;28(10):2731-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21546353</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2013 Jun 25;110(26):10848-53</Citation><ArticleIdList><ArticleId IdType="pubmed">23754401</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2007 Oct 1;23(19):2633-5</Citation><ArticleIdList><ArticleId IdType="pubmed">17586829</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2014 Jan;42(Database issue):D68-73</Citation><ArticleIdList><ArticleId IdType="pubmed">24275495</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2007 Apr;39(4):544-9</Citation><ArticleIdList><ArticleId IdType="pubmed">17369828</ArticleId></ArticleIdList></Reference><Reference><Citation>Genes Dev. 2002 Jul 1;16(13):1616-26</Citation><ArticleIdList><ArticleId IdType="pubmed">12101121</ArticleId></ArticleIdList></Reference><Reference><Citation>J Plant Physiol. 2012 Nov 1;169(16):1664-72</Citation><ArticleIdList><ArticleId IdType="pubmed">22647959</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2009 Jan 1;25(1):130-1</Citation><ArticleIdList><ArticleId IdType="pubmed">19017659</ArticleId></ArticleIdList></Reference><Reference><Citation>Hum Mol Genet. 2007 May 1;16(9):1124-31</Citation><ArticleIdList><ArticleId IdType="pubmed">17400653</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Biotechnol J. 2015 Aug;13(6):779-90</Citation><ArticleIdList><ArticleId IdType="pubmed">25532560</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Plant Sci. 2011 May;16(5):258-64</Citation><ArticleIdList><ArticleId IdType="pubmed">21466971</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Cancer. 2010 Jun;10(6):389-402</Citation><ArticleIdList><ArticleId IdType="pubmed">20495573</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 2005 Sep 23;352(3):585-96</Citation><ArticleIdList><ArticleId IdType="pubmed">16095614</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2015 Jun 26;5:11672</Citation><ArticleIdList><ArticleId IdType="pubmed">26115173</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2003 Aug 5;100(16):9440-5</Citation><ArticleIdList><ArticleId IdType="pubmed">12883005</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2008 Oct 17;322(5900):405-10</Citation><ArticleIdList><ArticleId IdType="pubmed">18818364</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2008 Sep 4;455(7209):58-63</Citation><ArticleIdList><ArticleId IdType="pubmed">18668040</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 2005 Nov;171(3):1257-65</Citation><ArticleIdList><ArticleId IdType="pubmed">16085705</ArticleId></ArticleIdList></Reference><Reference><Citation>J Theor Biol. 2006 Jul 21;241(2):252-61</Citation><ArticleIdList><ArticleId IdType="pubmed">16457852</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2014 Jan;15(1):22-33</Citation><ArticleIdList><ArticleId IdType="pubmed">24296533</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Cell. 2013 Oct 10;52(1):101-12</Citation><ArticleIdList><ArticleId IdType="pubmed">24055342</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Plant Biol. 2014 May 15;14:131</Citation><ArticleIdList><ArticleId IdType="pubmed">24884654</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2005 Jul;14(8):2611-20</Citation><ArticleIdList><ArticleId IdType="pubmed">15969739</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2014 Dec;80(6):1108-17</Citation><ArticleIdList><ArticleId IdType="pubmed">25345491</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2012;7(12):e53116</Citation><ArticleIdList><ArticleId IdType="pubmed">23300875</ArticleId></ArticleIdList></Reference><Reference><Citation>DNA Res. 2015 Feb;22(1):53-67</Citation><ArticleIdList><ArticleId IdType="pubmed">25428896</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Genet. 2011 Feb;7(2):e1002012</Citation><ArticleIdList><ArticleId IdType="pubmed">21383862</ArticleId></ArticleIdList></Reference><Reference><Citation>Hum Hered. 2002;53(2):79-91</Citation><ArticleIdList><ArticleId IdType="pubmed">12037407</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 2005 Jul 29;280(30):27595-603</Citation><ArticleIdList><ArticleId IdType="pubmed">15932881</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2009 Jun 1;25(11):1451-2</Citation><ArticleIdList><ArticleId IdType="pubmed">19346325</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Physiol. 2009 Dec;50(12):2133-45</Citation><ArticleIdList><ArticleId IdType="pubmed">19880401</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2007 Jan 26;315(5811):525-8</Citation><ArticleIdList><ArticleId IdType="pubmed">17185560</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Genomics. 2009 Jan 21;10:41</Citation><ArticleIdList><ArticleId IdType="pubmed">19159482</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2015 Jul;242(1):77-95</Citation><ArticleIdList><ArticleId IdType="pubmed">25833262</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2006;57(11):2601-12</Citation><ArticleIdList><ArticleId IdType="pubmed">16820394</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2003 Feb 12;19(3):376-82</Citation><ArticleIdList><ArticleId IdType="pubmed">12584123</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biotechnol. 2011 Oct;49(2):159-65</Citation><ArticleIdList><ArticleId IdType="pubmed">21359858</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2012;7(3):e33034</Citation><ArticleIdList><ArticleId IdType="pubmed">22442676</ArticleId></ArticleIdList></Reference><Reference><Citation>J Hered. 2012 Nov-Dec;103(6):853-62</Citation><ArticleIdList><ArticleId IdType="pubmed">23008443</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name></noRegion><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name><name sortKey="Phangthavong, Souksamone" sort="Phangthavong, Souksamone" uniqKey="Phangthavong S" first="Souksamone" last="Phangthavong">Souksamone Phangthavong</name><name sortKey="Song, Yuepeng" sort="Song, Yuepeng" uniqKey="Song Y" first="Yuepeng" last="Song">Yuepeng Song</name><name sortKey="Wang, Qingshi" sort="Wang, Qingshi" uniqKey="Wang Q" first="Qingshi" last="Wang">Qingshi Wang</name><name sortKey="Yang, Xiaohui" sort="Yang, Xiaohui" uniqKey="Yang X" first="Xiaohui" last="Yang">Xiaohui Yang</name><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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